Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Oliver, V. L., Athavale, S., Simon, K. E. et al. 2017. Evaluation of pain assessment techniques and analgesia efficacy in a female guinea pig (Cavia porcellus) model of surgical pain. JAALAS 56(4), 425-435.

Guinea pigs (Cavia porcellus) are a frequently used species in research, often involving potentially painful procedures. Therefore, evidence-based recommendations regarding analgesia are critically needed to optimize their wellbeing. Our laboratory examined the efficacy of carprofen...

Alligood, C. A., Dorey, N. R., Mehrkam, L. R. et al. 2017. Applying behavior-analytic methodology to the science and practice of environmental enrichment in zoos and aquariums. Zoo Biology 36(3), 175–185.

Environmental enrichment in zoos and aquariums is often evaluated at two overlapping levels: published research and day‐to‐day institutional record keeping. Several authors have discussed ongoing challenges with small sample sizes in between‐groups zoological research and...

de Lima Rocha, A. D., Menescal-de-Oliveira, L., da Silva, L. F. S. 2017. Effects of human contact and intra-specific social learning on tonic immobility in guinea pigs, Cavia porcellus. Applied Animal Behaviour Science 191, 1-4.

Social learning is the capacity of animals to acquire adaptive information from others. In the case of fear responses, animals can learn fearful or non-fearful responses by observing the behavior of conspecifics. Tonic immobility (TI)...

Rose, P. E., Nash, S. M., Riley, L. M. 2017. To pace or not to pace? A review of what abnormal repetitive behavior tells us about zoo animal management. Journal of Veterinary Behavior 20, 11-21.

Performance of abnormal repetitive behavior (ARB) is noted in many captive wild species. ARB can be categorized into 2 basic forms: those whose aim appears to be to compulsively reach an inappropriate goal and those...

Ferrecchia, C., Pincolini, K., Chum, H. et al. 2017. Husbandry of laboratory-housed Egyptian (Rousettus aegyptiacus) fruit bats. Laboratory Animal Science Professional 5(2) (June), 18-23.

The University of California, Berkeley, houses a variety of unique species, each requiring their own specific husbandry protocols, as well as additional enrichment and safety protocols. While housing of bats in zoological parks is common...

Skrinyer, A. J., Faure, P. A., Dannemiller, S. et al. 2017. Care and husbandry of the world’s only flying mammals. Laboratory Animal Science Professional 5(2) (June), 24-27.

Husbandry of these unusual and complicated creatures requires creativity and attention to species-specific needs. Authors from the Northeast Ohio Medical University (NEOMED), SUNY Downstate, and McMaster University formed a collaboration aimed at optimizing the health...

Krebs, B., Watters, J. 2017. Simple but temporally unpredictable puzzles are cognitive enrichment. Animal Behavior and Cognition 4(1), 119–134.

Provision of problem solving opportunities as enrichment for animals considered highly intelligent has increased over the last twenty years, but this emphasis on animals considered intelligent may overlook the need for cognitive challenge in species...

Razal, C., Bryant, J., Miller, L. 2017. Monitoring the behavioral and adrenal activity of giraffe (Giraffa camelopardalis) to assess welfare during seasonal housing changes. Animal Behavior and Cognition 4(2), 154–164.

In inclement weather, northern zoos are required to provide animals from warmer climates with indoor exhibits. These indoor exhibits are typically smaller, lack natural substrate, and have lower levels of stimulation for the animals. The...

Troxell-Smith, S., Watters, J., Whelan, C. et al. 2017. Zoo foraging ecology: Preference and welfare assessment of two okapi (Okapia johnstoni) at the Brookfield Zoo. Animal Behavior and Cognition 4(2), 187–199.

Applying principles of foraging ecology to zoo-housed animals can positively influence animal behavior, and assist with evaluating exhibit space and design. In this study, we implemented zoo foraging ecology by measuring giving-up densities (GUDs) in...

Schmitz, S., Tacke, S., Guth, B. et al. 2016. Comparison of physiological parameters and anaesthesia specific observations during isoflurane, ketamine-xylazine or medetomidine-midazolam-fentanyl anaesthesia in male guinea pigs. PLOS ONE 11(9), e0161258.

Guinea pigs (GPs) are difficult to anaesthetize successfully, the choices for anaesthesia are limited and physiological parameters are likely to be influenced substantially under anaesthesia. We implanted blood pressure radio-telemetry devices into 16 male GPs...

Coelho, C. M., de Azevedo, C. S., de Barros Vaz Guimarães, M. A. et al. 2016. Environmental enrichment effect on fecal glucocorticoid metabolites and captive maned wolf (Chrysocyon brachyurus) behavior. Journal of Applied Animal Welfare Science 19(4), 353-362.

Environmental enrichment is a technique that may reduce the stress of nonhuman animals in captivity. Stress may interfere with normal behavioral expression and affect cognitive decision making. Noninvasive hormonal studies can provide important information about...

Byrd, C. P., Winnicker, C., Gaskill, B. N. 2016. Instituting dark-colored cover to improve central space use within guinea pig enclosure. Journal of Applied Animal Welfare Science 19(4), 408-413.

Domestic guinea pigs (Cavia aperea f. porcellus) in laboratories have been shown to actively avoid the centers of their cages. This experiment tested a novel, dark-colored “shader” placed over the central portion of a cage...

Martin, R. A., Melfi, V. 2016. A comparison of zoo animal behavior in the presence of familiar and unfamiliar people. Journal of Applied Animal Welfare Science 19(3), 234-244.

As recorded in domestic nonhuman animals, regular interactions between animals in zoos and keepers and the resulting relationship formed (human– animal relationship [HAR]) are likely to influence the animals’ behaviors with associated welfare consequences. HAR...

Dunbar, M. L., David, E. M., Aline, M. R. et al. 2016. Validation of a behavioral ethogram for assessing postoperative pain in guinea pigs (Cavia porcellus). JAALAS 55(1), 29–34.

Although guinea pigs (Cavia porcellus) have been used in research for more than a century and remain the most prevalent USDA-covered species, little has been elucidated regarding the recognition of clinical pain or analgesic efficacy...

Cortés Duarte, A., Trujillo, F., Superina, M. 2016. Behavioral responses of three armadillo species (Mammalia: Xenarthra) to an environmental enrichment program in Villavicencio, Colombia. Zoo Biology 35(4), 304-312.

Enrichment is a powerful tool to improve the welfare of animals under human care. Stress‐related health and behavioral problems, as well as reproductive failure, are frequent in armadillos (Xenarthra, Cingulata, Dasypodidae) under human care, which...

Bohn, S. J., Turner, J. M., Warnecke, L. et al. 2016. Evidence of 'sickness behaviour' in bats with white-nose syndrome. Behaviour 153(8), 981-1003.

Many animals change behaviour in response to pathogenic infections. White-nose syndrome (WNS) is a fungal skin disease causing rapid declines of North American bats. Infection with Pseudogymnoascus destructans causes hibernating bats to arouse from torpor...

Bono, L., Mongillo, P., De Boni-Russo, G. et al. 2016. Effects of 2 forms of environmental enrichment on a group of captive blackbucks (Antilope cervicapra): A pilot study. Journal of Veterinary Behavior 12, 66-72.

The aim of this preliminary study was to assess the effects of 2 forms of environmental enrichment (i.e., branched tree trunk and brushes) on the behavior of a group of 8 captive blackbucks. Animals were...

Hanna, P., Frick, E., Kuczaj, S. 2016. A tool use task proves enriching for a captive sea otter (Enhydra lutris). Animal Behavior and Cognition 3(2), 88–94.

Environmental enrichment is used to improve an animal’s physical and psychological well-being while housed in a captive environment. Alligood and Leighty (2015) suggested that enrichment that emulates the natural and preferred behaviors of the species...

Tokumaru, R. S., Ades, C., Monticelli, P. F. 2015. Social support does not require attachment: Any conspecific tranquilizes isolated guinea-pig pups. Applied Animal Behaviour Science 171, 197-203.

Guinea pig pups produce typical distress whistles when isolated. Whistles’ frequency is decreased or abolished when they contact with the mother and, to a lesser degree, a sibling or even an unfamiliar female, is regained...

Giral, M., Amengol, C., Sanchez-Gomez, S. et al. 2015. Effects of changing to individually ventilated caging on guinea pigs (Cavia porcellus). JAALAS 54(3), 267-272.

The goal of this study was to evaluate the effect of changing to IVC housing on guinea pigs by recording several physiologic parameters in guinea pigs housed sequentially in open-top cages (OTC) and IVC. To...

Bayne, K. A., Beaver, B. V., Mench, J. A. et al. 2015. Laboratory animal behavior. In: Laboratory Animal Medicine, 3rd edition. Fox, J. G., Anderson, L., Otto, G., et al. (eds). Elsevier, Inc., Amsterdam, NL. pp. 1617-1651.

The study of laboratory animal behavior has increased steadily over the last decade, with expanding emphasis on a variety of commonly used species. In the United States, this trend was initially focused on species for...

Fay, C., Miller, L. 2015. Utilizing scents as environmental enrichment: Preference assessment and application with Rothschild giraffe. Animal Behavior and Cognition 2(3), 285–291.

Zoological institutions use environmental enrichment to increase opportunities for animals to engage in species-appropriate behavior. In these facilities, enrichment for giraffe typically consists of different types of feeders to increase the percentage of time spent...

Brewer, J. S., Bellinger, S. A., Prianca, J. et al. 2014. Enriched open field facilitates exercise and social interaction in 2 strains of guinea pigs (Cavia porcellus). JAALAS 53(4), 344-355.

Current housing guidelines for laboratory rodents include recommendations for enrichment. Working with guinea pigs, we have developed an open-field enrichment paradigm that provides several aspects of this species' natural environment. These naturalistic aspects include access...

Burlingame, L. A., Na, J., Dunbar, M. et al. 2014. Behavioral ethogram as a health assessment tool in a feline vaccine study. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 610. (Abstract #P227).

For infectious disease studies, assessment of feline health is traditionally limited to metrics such as body temperature (BT), change in body weight (BW), and clinical signs (CS). Recently, behavioral ethograms designed for assessment of rabbits...

Baszczak, J. A. 2014. An easy solution for social housing larger guinea pigs in research. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 565 (Abstract #P61).

The standard microisolation caging for guinea pigs, Cavia porcellus, allows for group housing up to a combined weight of 350 g. However, as mandated by the USDA, research facilities must socially house guinea pigs with...